CDS

Accession Number TCMCG066C05823
gbkey CDS
Protein Id XP_034580575.1
Location complement(join(12387573..12387658,12388104..12388282,12388809..12388893,12389039..12389266,12389460..12389520,12389608..12389678,12389764..12389870,12389948..12390080,12390737..12390887,12390983..12391085,12391173..12391281,12391411..12391570,12392580..12392681,12393107..12393224,12394614..12394768,12394956..12395051,12395147..12395245))
Gene LOC117843922
GeneID 117843922
Organism Setaria viridis

Protein

Length 680aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034724684.1
Definition ribosome biogenesis protein BOP1 homolog isoform X1 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category J
Description Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14824        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000463        [VIEW IN EMBL-EBI]
GO:0000470        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007276        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0019953        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0030686        [VIEW IN EMBL-EBI]
GO:0030687        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032504        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042273        [VIEW IN EMBL-EBI]
GO:0043021        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044703        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048609        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051302        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070545        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGCCACAACGAGAGGGAGCACGAGCACGAGGGCGATGACCTATCTGCCGACGACTCTTCCTGGAGCGACGGCGTCTGGTCCGAGGACGACGGCGAGGACTCGGTGTCGTTCGAGGACAGCGGCGAGGGCTCCGGGTCCGACGCCGAGTCCGACGAGGCGGTGGCAGAAGAGAGCGACTCGTCGGAGGATGAGGTGGCGCCAAGGAACACCGTGGGGGACGTGCCTCTGGAGTGGTACAAGGACGAGGAGCACATTGGGTACGACATTGATGGGAGGAAGATCAAGAAGCGCGATAGGGAGGGCCGCATCGAAGCCTACCTCAGGAACGCGGATGACGCTAAGAATTGGAGAAAGATCTATGATGAGTATAATGATGAGGAGGTTCAGATTACAAAGGAAGAGGCTAAGATAATTAGTAGATTATTAAAGGGAAGGACTCCACATGCCAATGTTGATCCATATCCAGATTATGTTGATTGGTTTGAATACGAGGATAAAGGTCATCCGCTTTCTAGTGCCCCTGAGCCAAAGAGGCGGTTCGTGCCTTCAAAGTGGGAGCAGAAGAAGGTTGTTAAACTTGTAAGAGCCATTCGTAATGGATGGATAAAGTTTGATAAGCCAAAGGAGGAAACTAACTTATATCTATTGTGGGGAGATGAAACTGATACAGCAGATAATAAGCGGCAAGGCTTGAGCTACATTCCAGCTCCTAAACCTAATTTACCAGGTCATGAAGAGTCATATAATCCTTCTGTTGAATACATTCCCACGCAAGAGGAAATAGATTCATACCAGCTTATGTATGAGGAGGATCGTCCAAAGTTTATTCCAAAACGATTTGAGTCCCTTCGAAGTGTACCTGCATATGAGAAGGCACTGAGGGAAGGTTTTGATCGATGTCTAGATCTGTATCTATGCCCTAGAACCCGCAAAAAGCGTATAAATATTGATCCTGAGTCACTCAAGCCCAAGTTACCAAGTAAAAAGGATTTGAGGCCATACCCAAAAACTTGTTACCTTGAGTTCAAGGGCCATGAGGGTCCTGTGAAATCAGTTTCAGTTGAAATGACTGGGCAGTGGCTTGCATCTGGTTCTTCCGATGGTACAATTCGTGTTTGGGAGGTTGAAACTGGTCGCTGTCTTAAAGTTTGGAATGTCGGAGGTGATGTCTGTCATATTGCCTGGAATCCTGCACCTGACAGGCCTATTCTTGCTGCTATTGTAGAACATGACCTGCTACTTATTAATGCTGGGGTGGGGAGTGAAGAAGTGCAAATTAGGGCAAAAGAGCTCCTGCAAATTGGCGAAATGGTTCCTCAAGATGATACTGATGGTAAGAAACCAGCTGTGAGGTGGATGAAGCACGAAAAACTGGATGGAATCACCTTGATTCATCATAAGGCTGTGTCAAATGTGGACTGGCATTTTAAGGGAGATTACTTTACCACAGTTGTGCCTAGTGGCAATACAAAAGCTGTATTGTTGCATCAGCTCTCGAAAAAGCACTCGCACCATCCTTTCCGTAAACTGCCAGGCCTTCCTGTTGCGGCAACATTCCATCCAAGTGAGAAGATGTTCTTTGTTGCTACTAAGAAGTTCATTCAGGTTTATGATCTCCAAAAGGCACAGTTGGTAAAGAAACTGGAGTCAGGTCTTCGTGAGATTTCCTCTATCTCGATCCATCCTGGTGGTGATAATGTTATTGTGGGAAGCAAAGATGGCAAACTATGCTGGTTTGATACTGACCTATCTACACGACCATACAAGACTCTAAAGACCCACTCGAAGGATATTACGAGTGTTACTTTTCACAGAAAGTACCCTCTTTTTGCCTCATCCTCCGAGGATTGTACTGCCTATGTATGTCATGGAATGGTCTATTCTGATCTTAACCAGAACCCACTTATTGTACCATTGGAAATTCTTCGTGGCCATTCTAGTTCAGATGGAAGAGGGGTTTTAGACTGCAAGTTCCATCCAAAACAGCCTTGGTTGTTCACTGCTGGTGCTGACTCCGTGATTAGACTATATTGCGACTAA
Protein:  
MGHNEREHEHEGDDLSADDSSWSDGVWSEDDGEDSVSFEDSGEGSGSDAESDEAVAEESDSSEDEVAPRNTVGDVPLEWYKDEEHIGYDIDGRKIKKRDREGRIEAYLRNADDAKNWRKIYDEYNDEEVQITKEEAKIISRLLKGRTPHANVDPYPDYVDWFEYEDKGHPLSSAPEPKRRFVPSKWEQKKVVKLVRAIRNGWIKFDKPKEETNLYLLWGDETDTADNKRQGLSYIPAPKPNLPGHEESYNPSVEYIPTQEEIDSYQLMYEEDRPKFIPKRFESLRSVPAYEKALREGFDRCLDLYLCPRTRKKRINIDPESLKPKLPSKKDLRPYPKTCYLEFKGHEGPVKSVSVEMTGQWLASGSSDGTIRVWEVETGRCLKVWNVGGDVCHIAWNPAPDRPILAAIVEHDLLLINAGVGSEEVQIRAKELLQIGEMVPQDDTDGKKPAVRWMKHEKLDGITLIHHKAVSNVDWHFKGDYFTTVVPSGNTKAVLLHQLSKKHSHHPFRKLPGLPVAATFHPSEKMFFVATKKFIQVYDLQKAQLVKKLESGLREISSISIHPGGDNVIVGSKDGKLCWFDTDLSTRPYKTLKTHSKDITSVTFHRKYPLFASSSEDCTAYVCHGMVYSDLNQNPLIVPLEILRGHSSSDGRGVLDCKFHPKQPWLFTAGADSVIRLYCD